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Requirements

Please make sure to follow the instructions for compiling python prior to building ROOT since ROOT needs to be built against python.  ROOT may also be built against MySQL on the linuxes.  Also note that often the version of the source we utilize for ROOT is Fermi-specific where patches have been applied or the version of ROOT is from a branch from their Subversion repository.

v5.26.00a-gl1

Includes patch to TMVA Config.h and Config.cxx for windows

redhat5-i686-32bit-gcc41

  • Build on rhel5-32 or bldlnx09
  • Requires our MySQL installation, as well as Oracle
  • Need fftw3, gccxml, GSL to be built.  Obtain FFTW 3.1.2 from:  http://www.fftw.org/download.html
    ./configure --enable-portable-binary --enable-shared --prefix=$PWD "make" "make install"
    Obtain GSL 1.10 from: http://www.gnu.org/software/gsl/  ./configure --prefix=$PWD  "make"  "make install"
    obtain gccxml 0.9.0_20090601 from http://lcgsoft.cern.ch/index.py?page=pkg_version&pkg=gccxml&vers=0.9.0_20090601 require cmake to build: http://www.cmake.org/cmake/resources/software.html
    mkdir gccxml-build
    cd gccxml-build
    cmake -DCMAKE_INSTALL_PREFIX:PATH=$PWD ../gccxml  (where gccxml contains the downloaded source)
    make
    make install
  • Obtain Fermi's copy of the source from /afs/slac/g/glast/ground/GLAST_EXT/srcExtlibs/root-v5.26.00a-gl1.src..tar.gz and unpack, it will be dumped into a directory named "root"
  • set ROOTSYS to the same directory as the source was checked out into.  cd into the root directory
  • Run configure:
    ./configure linux --fail-on-missing --enable-mysql --with-mysql-incdir=/afs/slac/g/glast/ground/GLAST_EXT/redhat4-i686-32bit-gcc34/mysql/5.1.39/gcc34/include/mysql --with-mysql-libdir=/afs/slac/g/glast/ground/GLAST_EXT/redhat4-i686-32bit-gcc34/mysql/5.1.39/gcc34/lib/mysql --enable-xrootd --enable-python --with-python-incdir=/afs/slac/g/glast/ground/GLAST_EXT/redhat4-i686-32bit-gcc34/python/2.5.1-gl1/gcc34/include/python2.5 --with-python-libdir=/afs/slac/g/glast/ground/GLAST_EXT/redhat4-i686-32bit-gcc34/python/2.5.1-gl1/gcc34/lib/python2.5/config --enable-reflex --enable-cintex --enable-roofit --with-oracle-incdir=/usr/oracle/rdbms/public --with-oracle-libdir=/usr/oracle/lib --enable-minuit2 --enable-unuran --enable-table --enable-explicitlink --with-gccxml=$userSpace/root-v5.26-gl1/gccxml/0.9.0_20090601/slc4_ia32_gcc34/bin --enable-gdml --enable-genvector --enable-mathcore --enable-mathmore --with-fftw3-incdir=$userSpace/root-v5.26-gl1/fftw3/3.1.2/slc4_ia32_gcc34/include --with-fftw3-libdir=$userSpace/root-v5.26-gl1/fftw3/3.1.2/slc4_ia32_gcc34/lib --with-gsl-incdir=$userSpace/root-v5.26-gl1/GSL/1.10/slc4_ia32_gcc34/include --with-gsl-libdir=$userSpace/root-v5.26-gl1/GSL/1.10/slc4_ia32_gcc34/lib  > & config-rhel4.log &
  • Build by running "make >& build-rhel5.log &"
  • Update etc/system.rootrc to include the lines:
    # As suggested by Wilko, April, 2009, so that when a job writes to xrootd, missing directories are created upon request.
    XNet.Mkpath: 1
  • Copy the following into $GLAST_EXT using the directory structure:
    ROOT/v5.26.00a-gl1/gcc41/
    README bin build-rhel5.log cint config-rhel4.log doc etc fonts icons include lib macros man test tutorials

redhat4-i686-32bit-gcc34

  1. Obtain Fermi's copy of the source from /afs/slac/g/glast/ground/GLAST_EXT/srcExtlibs/root-v5.26.00a-gl1.src..tar.gz and unpack, it will be dumped into a directory named "root"
  2. set ROOTSYS to the same directory as the source was checked out into.  cd into the root directory
  3. Run configure:
    ./configure linux --fail-on-missing --enable-mysql --with-mysql-incdir=/afs/slac/g/glast/ground/GLAST_EXT/redhat4-i686-32bit-gcc34/mysql/5.1.39/gcc34/include/mysql --with-mysql-libdir=/afs/slac/g/glast/ground/GLAST_EXT/redhat4-i686-32bit-gcc34/mysql/5.1.39/gcc34/lib/mysql --enable-xrootd --enable-python --with-python-incdir=/afs/slac/g/glast/ground/GLAST_EXT/redhat4-i686-32bit-gcc34/python/2.5.1-gl1/gcc34/include/python2.5 --with-python-libdir=/afs/slac/g/glast/ground/GLAST_EXT/redhat4-i686-32bit-gcc34/python/2.5.1-gl1/gcc34/lib/python2.5/config --enable-reflex --enable-cintex --enable-roofit --with-oracle-incdir=/usr/oracle/rdbms/public --with-oracle-libdir=/usr/oracle/lib --enable-minuit2 --enable-unuran --enable-table --enable-explicitlink --with-gccxml=$userSpace/root-v5.26-gl1/gccxml/0.9.0_20090601/slc4_ia32_gcc34/bin --enable-gdml --enable-genvector --enable-mathcore --enable-mathmore --with-fftw3-incdir=$userSpace/root-v5.26-gl1/fftw3/3.1.2/slc4_ia32_gcc34/include --with-fftw3-libdir=$userSpace/root-v5.26-gl1/fftw3/3.1.2/slc4_ia32_gcc34/lib --with-gsl-incdir=$userSpace/root-v5.26-gl1/GSL/1.10/slc4_ia32_gcc34/include --with-gsl-libdir=$userSpace/root-v5.26-gl1/GSL/1.10/slc4_ia32_gcc34/lib  > & config-rhel4.log &
  4. Build by running "make >& build-rhel4.log &"
  5. Update etc/system.rootrc to include the lines:
    # As suggested by Wilko, April, 2009, so that when a job writes to xrootd, missing directories are created upon request.
    XNet.Mkpath: 1
  6. Copy the following into $GLAST_EXT using the directory structure:
    ROOT/v5.26.00a-gl1/gcc34/
    README bin build-rhel4.log cint config-rhel4.log doc etc fonts icons include lib macros man test tutorials

Windows

If cygwin is not already installed, installcygwin including gcc, make, etc  NOTE:  cygwin's link.exe application must be renamed, so that VC's link will be used for the build.
http://root.cern.ch/twiki/bin/view/ROOT/PatchesV5-14-00

Python 2.5.1 for windows, FFTW 3.1.2 from http://www.fftw.org/install/windows.html, obtained gccxml from Gaudi v21r7 distribution
downloaded gccxml from http://www.gccxml.org/HTML/Index.html

  1. Obtain Fermi's copy of the source from /afs/slac/g/glast/ground/GLAST_EXT/srcExtlibs/root-v5.26.00a-gl1.src..tar.gz and unpack, it will be dumped into a directory named "root"
  2. In a DOS window
    set PATH=
    set LIB=
    set INCLUDE=
    "C:\Program Files\Microsoft Visual Studio .NET 2003\Common7\Tools\vsvars32.bat"
    set ROOTSYS=C:\heather\root-v5.20-gl1\root
    set PYTHONDIR=C:\heather\glast\extlib\python\2.5.1-gl1\vc71
    set PYTHONPATH=%ROOTSYS%\bin
    set ROOTBUILD=opt
    set LIB=C:\Program Files\Microsoft Platform SDK for Windows Server 2003 R2\Lib;C:\Program Files\Microsoft Visual Studio 8\SDK\v2.0\Lib;%LIB%;%ROOTSYS%\lib
    set PATH=C:\heather\glast\extlib\python\2.5.1-gl1\vc71;%ROOTSYS%\bin;C:\Program Files\Microsoft Platform SDK for Windows Server 2003 R2\Bin;C:\Program Files\Microsoft Platform SDK for Windows Server 2003 R2\Lib;%PATH%;%ROOTSYS%\lib
    set INCLUDE=C:\Program Files\Microsoft Platform SDK for Windows Server 2003 R2\Include;C:\Program Files\Microsoft Visual Studio 8\SDK\v2.0\include;%INCLUDE%
  3. Start up cygwin:  bash --login -i
  4. Run ./confgure:
    ./configure win32 --enable-roofit --enable-minuit2 --enable-table --enable-python --enable-gdml --enable-unuran --disable-odbc --enable-mathmore --enable-genvector --enable-tmva --enable-reflex --enable-cintex --enable-xrootd --with-fftw3-incdir=C:/heather/root-v5.20-gl1/fftw3/3.1.2/win32_vc71/include --with-fftw3-libdir=C:/heather/root-v5.20-gl1/fftw3/3.1.2/win32_vc71/lib --with-gccxml=C:/heather/root-v5.20-gl1/GCC_XML/0.9.0_20090601/win32_vc71/bin --with-python-libdir=C:/heather/glast/extlib/python/2.5.1-gl1/vc71/libs --with-python-incdir=C:/heather/glast/extlib/python/2.5.1-gl1/vc71/include
  5. make

v5.22.00e-gl1

Includes updated xrootd from Wilko (same as in v5.20.00-gl5)

redhat4-i686-32bit-gcc34

  1. Obtain Fermi's copy of the source from /afs/slac/g/glast/ground/GLAST_EXT/srcExtlibs/root-v5.22.00e-gl1.tar.gz and unpack, it will be dumped into a directory named "root"
  2. set ROOTSYS to the same directory as the source was checked out into.  cd into the root directory
  3. Run configure:
    ./configure linux --fail-on-missing --enable-mysql --with-mysql-incdir=/afs/slac/g/glast/ground/GLAST_EXT/redhat4-i686-32bit-gcc34/mysql/5.1.39/gcc34/include/mysql --with-mysql-libdir=/afs/slac/g/glast/ground/GLAST_EXT/redhat4-i686-32bit-gcc34/mysql/5.1.39/gcc34/lib/mysql --enable-xrootd --enable-python --with-python-incdir=/afs/slac/g/glast/ground/GLAST_EXT/redhat4-i686-32bit-gcc34/python/2.5.1-gl1/gcc34/include/python2.5 --with-python-libdir=/afs/slac/g/glast/ground/GLAST_EXT/redhat4-i686-32bit-gcc34/python/2.5.1-gl1/gcc34/lib/python2.5/config --enable-reflex --enable-cintex --enable-roofit --with-oracle-incdir=/usr/oracle/rdbms/public --with-oracle-libdir=/usr/oracle/lib --enable-minuit2 --enable-unuran --enable-table --enable-explicitlink --with-gccxml=$userSpace/gaudi_v21r4/gccxml/0.9.0_20090601/slc4_ia32_gcc34/bin --enable-gdml > & config-rhel4.log &
  4. Build by running "make >& build-rhel4.log &"
  5. Update etc/system.rootrc to include the lines:
    # As suggested by Wilko, April, 2009, so that when a job writes to xrootd, missing directories are created upon request.
    XNet.Mkpath: 1
  6. Copy the following into $GLAST_EXT using the directory structure:
    ROOT/v5.22.00e-gl1/gcc34/
    README bin build-rhel4.log cint config-rhel4.log doc etc fonts icons include lib macros man test tutorials

v5.20.00-gl5

We ran into a problem this time with distribution of our linux build for ROOT.  It seems prefix cannot be used, so we must set the ROOTSYS env var for our build.  make install no longer seems to work unless prefix is used, so we are left to prune the resulting ROOT build directories on our own.

redhat4-x86_64-64bit-gcc34

  1. Obtain Fermi's copy of the source from /afs/slac/g/glast/ground/GLAST_EXT/srcExtlibs/root-v5.20.00-gl5.tar.gz and unpack, it will be dumped into a directory named "root"
  2. set ROOTSYS to the same directory as the source was checked out into.  cd into the root directory
  3. Run configure:
    ./configure linuxx8664gcc --fail-on-missing --enable-mysql --with-mysql-incdir=/afs/slac/g/glast/ground/GLAST_EXT/redhat4-x86_64-64bit-gcc34/mysql/4.1.18/gcc34/include/mysql --with-mysql-libdir=/afs/slac/g/glast/ground/GLAST_EXT/redhat4-x86_64-64bit-gcc34/mysql/4.1.18/gcc34/lib/mysql --enable-xrootd --enable-python --with-python-incdir=/afs/slac/g/glast/ground/GLAST_EXT/redhat4-x86_64-64bit-gcc34/python/2.5.1-gl1/gcc34/include/python2.5 --with-python-libdir=/afs/slac/g/glast/ground/GLAST_EXT/redhat4-x86_64-64bit-gcc34/python/2.5.1-gl1/gcc34/lib/python2.5/config --enable-reflex --enable-cintex --enable-roofit --with-oracle-incdir=/usr/oracle/rdbms/public --with-oracle-libdir=/usr/oracle/lib --enable-minuit2 --enable-unuran --enable-table --enable-explicitlink > & config-rhel4.log &
  4. Build by running "make >& build-rhel4.log &"
  5. Update etc/system.rootrc to include the lines:
    # As suggested by Wilko, April, 2009, so that when a job writes to xrootd, missing directories are created upon request.
    XNet.Mkpath: 1
  6. Copy the following into $GLAST_EXT using the directory structure:
    ROOT/v5.20.00-gl4/gcc34/
    README bin build-rhel4.log cint config-rhel4.log doc etc fonts icons include lib macros man test tutorials

redhat3-i686-32bit-gcc32

  1. Obtain Fermi's copy of the source from /afs/slac/g/glast/ground/GLAST_EXT/srcExtlibs/root-v5.20.00-gl5.tar.gz and unpack, it will be dumped into a directory named "root"
  2. set ROOTSYS to the same directory as the source was checked out into.  cd into the root directory
  3. Run configure:
    ./configure linux --fail-on-missing --enable-mysql --with-mysql-incdir=/afs/slac/g/glast/ground/GLAST_EXT/redhat3-i686-32bit-gcc32/mysql/4.1.18/gcc32/include/mysql --with-mysql-libdir=/afs/slac/g/glast/ground/GLAST_EXT/redhat3-i686-32bit-gcc32/mysql/4.1.18/gcc32/lib/mysql --enable-xrootd --enable-python --with-python-incdir=/afs/slac/g/glast/ground/GLAST_EXT/redhat3-i686-32bit-gcc32/python/2.5.1-gl1/gcc32/include/python2.5 --with-python-libdir=/afs/slac/g/glast/ground/GLAST_EXT/redhat3-i686-32bit-gcc32/python/2.5.1-gl1/gcc32/lib/python2.5/config --enable-reflex --enable-cintex --enable-roofit --with-oracle-incdir=/usr/oracle/rdbms/public --with-oracle-libdir=/usr/oracle/lib --enable-minuit2 --enable-unuran --enable-table --enable-explicitlink > & config-rhel3.log &
  4. Build by running "make >& build-rhel3.log &"
  5. Update etc/system.rootrc to include the lines:
    # As suggested by Wilko, April, 2009, so that when a job writes to xrootd, missing directories are created upon request.
    XNet.Mkpath: 1
  6. Copy the following into $GLAST_EXT using the directory structure:
    ROOT/v5.20.00-gl4/gcc32/
    README bin build-rhel3.log cint config-rhel3.log doc etc fonts icons include lib macros man test tutorials

redhat4-i686-32bit-gcc34

  1. Obtain Fermi's copy of the source from /afs/slac/g/glast/ground/GLAST_EXT/srcExtlibs/root-v5.20.00-gl5.tar.gz and unpack, it will be dumped into a directory named "root"
  2. set ROOTSYS to the same directory as the source was checked out into.  cd into the root directory
  3. Run configure:
    ./configure linux --fail-on-missing --enable-mysql --with-mysql-incdir=/afs/slac/g/glast/ground/GLAST_EXT/redhat4-i686-32bit-gcc34/mysql/4.1.18/gcc34/include/mysql --with-mysql-libdir=/afs/slac/g/glast/ground/GLAST_EXT/redhat4-i686-32bit-gcc34/mysql/4.1.18/gcc34/lib/mysql --enable-xrootd --enable-python --with-python-incdir=/afs/slac/g/glast/ground/GLAST_EXT/redhat4-i686-32bit-gcc34/python/2.5.1-gl1/gcc34/include/python2.5 --with-python-libdir=/afs/slac/g/glast/ground/GLAST_EXT/redhat4-i686-32bit-gcc34/python/2.5.1-gl1/gcc34/lib/python2.5/config --enable-reflex --enable-cintex --enable-roofit --with-oracle-incdir=/usr/oracle/rdbms/public --with-oracle-libdir=/usr/oracle/lib --enable-minuit2 --enable-unuran --enable-table --enable-explicitlink > & config-rhel4.log &
  4. Build by running "make >& build-rhel4.log &"
  5. Update etc/system.rootrc to include the lines:
    # As suggested by Wilko, April, 2009, so that when a job writes to xrootd, missing directories are created upon request.
    XNet.Mkpath: 1
  6. Copy the following into $GLAST_EXT using the directory structure:
    ROOT/v5.20.00-gl4/gcc34/
    README bin build-rhel4.log cint config-rhel4.log doc etc fonts icons include lib macros man test tutorials

tiger-i386-32bit-gcc40

  1. Obtain Fermi's copy of the source from /afs/slac/g/glast/ground/GLAST_EXT/srcExtlibs/root-v5.20.00-gl5.tar.gz and unpack, it will be dumped into a directory named "root"
  2. setup your environment, where we have cd'd into the root directory created when the source was unpacked:
    setenv GLAST_EXT /afs/slac/g/glast/ground/GLAST_EXT/tiger-i386-32bit-gcc40/
    setenv ROOTSYS $PWD
    setenv LD_LIBRARY_PATH ${ROOTSYS}/lib:${ROOTSYS}/lib/root
    setenv PATH            ${GLAST_EXT}/python/2.5.1-gl3/gcc40/bin:/bin:/sbin:/usr/b
    in:/usr/sbin:@sys/usr/bin:${ROOTSYS}/bin
    setenv PYTHONHOME ${GLAST_EXT}/python/2.5.1-gl3/gcc40/lib/python2.5
    setenv PYTHONPATH ${PYTHONHOME}:${ROOTSYS}/bin:${ROOTSYS}/lib
    setenv DYLD_LIBRARY_PATH ${ROOTSYS}/lib
  3. Run configure:
    ./configure --disable-mysql --enable-python --with-python-incdir=/afs/slac.stanford.edu/g/glast/ground/GLAST_EXT/tiger-i386-32bit-gcc40/python/2.5.1-gl3/gcc40/include/python2.5 --with-python-libdir=/afs/slac.stanford.edu/g/glast/ground/GLAST_EXT/tiger-i386-32bit-gcc40/python/2.5.1-gl3/gcc40/lib/python2.5/config --enable-roofit --disable-odbc --enable-minuit2 --enable-unuran --enable-table --enable-explicitlink >& config-tiger.log &
  4. Build by running "make >& build-tiger.log &"
  5. libPyROOT.dylib must be rebuilt, due to a need to make it a "bundle" rather than "shared library":
    cd into pyroot/src directory and do:
    g++ -flat_namespace -bundle *.o -bundle_loader $GLAST_EXT/python/2.5.1-g3/gcc40/bin/python -L$ROOTSYS/lib -ldl -lCore -lCint -lRIO -lNet -lHist -lGraf -lGraf3d -lGpad -lTree -lMatrix -lMathCore -lThread -lReflex -L$GLAST_EXT/python/2.5.1-gl3/gcc40/lib/python2.5/config -lpython2.5 -o libPyROOT.dylib
    See:  https://savannah.cern.ch/bugs/index.php?22003
  6. The *.dylib files will have their references to other ROOT libraries hard-coded.  This must be fixed before the libraries can be distributed.  Both the ids and the ROOT libraries referenced must be updated.
    1. First check the id and references using:
      otool -L name.dylib.  i.e.  otool -L libCint.dylib
    2. Next update the id using the command: 
      install_name_tool -id newID fileName  i.e. install_name_tool -id libCint.dylib libCint.dylib
    3. For any ROOT libraries referenced do: 
      install_name_tool -change oldName newName fileName  i.e install_name_tool -change $ROOTSYS/lib/libNet.dylib libNet.dylib libPyROOT.dylib
  7. Update etc/system.rootrc to include the lines:
    # As suggested by Wilko, April, 2009, so that when a job writes to xrootd, missing directories are created upon request.
    XNet.Mkpath: 1
  8. Copy the following into $GLAST_EXT using the directory structure:
    ROOT/v5.20.00-gl4/gcc40/
    README bin build-tiger.log cint config-tiger.log doc etc fonts icons include lib macros man test tutorials
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