Scripts
Simulation and its processing scripts are in
cxif5315/sim* e.g.: sim00-README sim01-make-quaternions.py sim02-run-pattern-sim.py sim03-plot-image-from-h5-file.py sim04-proc-h5-files.py sim05-run-peakfinder.py sim06-filter-peaks.py sim07-fit-peaks.py sim08-indexing.py sim-cell-fiber.cell sim-det1500x1500.geom
File sim00-README
explains how to use all scripts.
Filtered peaks after peakfinding
- Orientation sample:
x72-y3-z0-180
- Script:
sim06-filter-peaks.py
- removes peak from beam direction
- number of peaks in EQU > 1 ??? (fit would not work for single peak)
ARC peaks
EQU peaks
Fitting peaks and finding angles phi and beta
EQU
ARC l=+1
Image phi-rotation and fraser transformation
Run script:
./sim08-indexing.py
./sim08-indexing.py --do_img_fraser
./sim08-indexing.py --do_img_fraser --do_img_phi
to get raw, phi-rotated, and fraser-transformed images
Overview
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