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cryoEM DAQ

 

  • Actors
    • cryoEM Operator is the operating the TEM at authorised period for data acquisition
    • Local Administrator Account to control login authorisation based on who should have access
    • Data Acquisition Collaborator(s) are people who have SLAC accounts whom the cryoEM Operator may want to help operate the TEM
    • Researchers are users who would use the compute and storage facilities at SLAC to process the data that has been acquired.
  • Resources
    • Local Windows Machine
      • Connected to SLAC Active Directory
      • Runs MinSec (virus scanner, cyber security backdoor, centralised logging and authentication)
      • Has RAID Storage?
    • Local Unix Machine
      • Contains GPUs for preprocessing (alignment, ctffind, unblur, summovie etc)
      • Shares storage with Local Windows Machine (somehow)
    • GPFS LTS Storage + TSM HSM Tape
      • Long term data storage (multi petabyte)
      • Automatic policies to stage unused/not-hot data to tape for cheaper storage needs
      • Clustered parallel file system
    • Bullet CPU Cluster
      • CPU based cluster (5,000 cores); infiniband + 10GbE
    • GPU Cluster
      • TBD
    • Batch Login Hosts
      • 'Head' nodes where Researchers log in to access compute and storage resources
  • Other/TBD
    • Data Transfer Nodes (to Stanford etc)

 

 

 

 

 

 

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