Intercept batch node for interactive session
bsub -Is -q psnehprioq /bin/tcsh
Regular job submission to batch
bsub -q psfehq -o log-r169.log psana -c psana-config.cfg exp=cxif5315:run=169 bsub -q psfehq -o log-r169.log python psana-python.py
List of batch jobs
bjobs bjobs -u dubrovin bjobs -uall -q psfehhiprioq
Status of hosts in the batch farm
List of LCLS farms: psnehfarm psfehfarm psanafarm
bhosts bhosts psnehfarm psfehfarm psanafarm bhosts | grep ps
Status of batch queues
list of LCLS queues: psnehhiprioq psfehhiprioq psnehprioq psfehprioq psanaq psnehq psfehq
bqueues - list all batch queuse bqueues | grep ps bqueues psnehhiprioq psfehhiprioq psnehprioq psfehprioq psanaq psnehq psfehq
List of batch hosts
lshost - listing of all batch machines along with their resources
lshosts | grep ps
Other commands
bqueues - Summary status of entire batch system organized by queues.
bqueues -l long - Detailed summary status of the 'long' queue.
lshosts - Very long listing of all batch machines along with their resources.
bmod - Change the queue for a submitted job.
bhist - Get history information for completed jobs.
lsinfo - List all 'resources' defined in batch system.
busers - Summary of my batch activity.
qstat
Re-direct output in file
All POSIX operating systems have 3 streams: stdin, stdout, and stderr.
stdout is the primary output, which is redirected with >, >>, or |.
command > file.txt command >> file.txt # to append command >& file.txt # re-direct stdout and stderr command 1>& file.txt # 1-stdout command 2>& file.txt # 2-stderr command 2> /dev/null # silence error
References
Overview
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