A quick walk-through of the tools that exist for analysis of xtc files with python.
The main focus is on pyana, and the examples are from and for XPP primarily,
but may be useful examples to other experiments too.
The Basics
Python
http://docs.python.org/tutorial/
Pyana
Analysis Workbook. Python-based Analysis
Exploring an xtc file
pyxtcreader
pyxtcreader -h usage: pyxtcreader [options] xtc-files ... options: -h, --help show this help message and exit -v, --verbose -l L1_OFFSET, --l1-offset=L1_OFFSET
Loops through the xtc datagrams and dumps info to screen. I recommend piping it to 'less'.
xtcscanner
xtcscanner -h usage: xtcscanner [options] xtc-files ... options: -h, --help show this help message and exit -n NDATAGRAMS, --ndatagrams=NDATAGRAMS -v, --verbose -l L1_OFFSET, --l1-offset=L1_OFFSET -e, --epics
Similar to pyxtcreader in that it loops throug xtc datagrams, but doesn't print to screen. Internally counts the datatypes it finds, and at the end dumps a summary only. Optinally prints out epics information (default no).
Example output:
xtcscanner /reg/d/psdm/xpp/xppi0310/xtc/e81-r0098-s0* Scanning.... Start parsing files: ['/reg/d/psdm/xpp/xppi0310/xtc/e81-r0098-s00-c00.xtc', '/reg/d/psdm/xpp/xppi0310/xtc/e81-r0098-s01-c00.xtc'] 14826 datagrams read in 4.120000 s . . . . . . . ------------------------------------------------------------- XtcScanner information: - 61 calibration cycles. - Events per calib cycle: [240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240, 240] Information from 1 control channels found: fs2:ramp_angsft_target Information from 11 devices found BldInfo:EBeam: EBeamBld_V1 (14641) BldInfo:FEEGasDetEnergy: FEEGasDetEnergy (14563) Any (78) BldInfo:NH2-SB1-IPM-01: SharedIpimb (14641) BldInfo:PhaseCavity: PhaseCavity (14641) DetInfo:EpicsArch-0|NoDevice-0: Epics_V1 (107580) DetInfo:NoDetector-0|Evr-0: EvrConfig_V4 (62) EvrData_V3 (14640) DetInfo:XppSb2Ipm-1|Ipimb-0: IpimbConfig_V1 (1) IpmFexConfig_V1 (1) IpimbData_V1 (14640) IpmFex_V1 (14640) DetInfo:XppSb3Ipm-1|Ipimb-0: IpimbConfig_V1 (1) IpmFexConfig_V1 (1) IpimbData_V1 (14640) IpmFex_V1 (14640) DetInfo:XppSb3Pim-1|Ipimb-0: IpimbConfig_V1 (1) IpmFexConfig_V1 (1) IpimbData_V1 (14640) IpmFex_V1 (14640) DetInfo:XppSb4Pim-1|Ipimb-0: IpimbConfig_V1 (1) IpmFexConfig_V1 (1) IpimbData_V1 (14640) IpmFex_V1 (14640) ProcInfo:: RunControlConfig_V1 (62) XtcScanner is done! -------------------------------------------------------------
xtcexplorer
XTC Explorer - GUI interface that builds pyana modules for you.
Extracting the data with pyana, some examples
Point detector delay scan
- Fetching the ControlPV information
def begincalibcycle( self, evt, env ) : # get updated configuration object at each calibcycle. ctrl_config = env.getConfig(TypeId.Type.Id_ControlConfig) for ic in range (0, ctrl_config.npvControls() ): cpv = ctrl_config.pvControl(ic) if cpv.name()=="fs2:ramp_angsft_target": # store the value in a class variable (visible in every class method) self.current_pv_value = cpv.value() )
- Fetching the IPIMB information
def event( self, evt, env ) : # Use "XppSb3Ipm-1|Ipimb-0" (a.k.a. IPM3) for normalization and filtering ipmN_raw = evt.get(TypeId.Type.Id_IpimbData, "XppSb3Ipm-1|Ipimb-0") ipmN_fex = evt.get(TypeId.Type.Id_IpmFex, "XppSb3Ipm-1|Ipimb-0") # we use the IpmFex information, and choose to use the sum # of all channel values for normalization and filtering ipmN_norm = ipmN_fex.sum # Use "XppSb3Pim-1|Ipimb-0" (a.k.a. PIM3) channel 1 as signal ipmS_raw = evt.get(TypeId.Type.Id_IpimbData, "XppSb3Pim-1|Ipimb-0" ) ipmS_fex = evt.get(TypeId.Type.Id_IpmFex, "XppSb3Pim-1|Ipimb-0" ) # Here, we use IpmFex channel 1 (counting from 0) as the signal ipm_sig = ipmS_fex.channel[1]
- Fetching the Phase Cavity information
def event(self, evt, env): pc = evt.getPhaseCavity() phasecav1 = pc.fFitTime1 phasecav2 = pc.fFitTime2 charge1 = pc.fCharge1 charge2 = pc.fCharge2
- Computing the delay time and making histograms
def event(self, evt, env): delaytime = self.current_pv_value + phasecav1*1e3 # The "histograms" are nothing but python lists. Append to them, and turn them into arrays at the end. self.h_ipm_rsig.append( ipm_sig ) self.h_ipm_nsig.append( ipm_sig/ipm_norm ) self.h_delaytime.append( delaytime )
Image peak finding
CSPad images and tile arangements
Saving data arrays
Plotting with MatPlotLib
Interactive analysis with iPython
Non-interactive batch analysis
Overview
Content Tools