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Once you have submitted the peak finder job, let's plot the number of peaks found for each event.
In the small data panel, type the CXIDB filename:
- filename: /reg/d/psdm/cxi/cxitut13/scratch/<username>/psocake/r0010/cxitut13_0010.cxi
- metric_dataset: /entry_1/result_1/nPeaksAll
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You can click on the red marker in the plot to jump to the corresponding events. These lysozyme diffraction patterns have between 15 to 60 peaks.
Note: If you already have indexed the crystals, you can jump to the indexed patterns by using:
- dataset: /entry_1/result_1/indexed
Indexing crystals
If you are on a psana machine, you can run CrystFEL programs by setting up your environment:
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