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Note the DS1 and DS2 chambers can move to different locations. Also, Camera1 and Camera2 can move between DS1 and DS2 chambers. Sample chambers, SC1-SC3 are fixed.
Geometries
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Date | Who uploaded | Experiment | Geometry File Name | File Type | DAQ "Source" Name (Ds1/Ds2) | Front/Back | Camera | Comment |
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20160929cxic0315 | cxic0315CxiDs2CspadBack | Valid from 21/Sep/16 | Jungfrau | Indexed lysozyme run123 with CrystFEL |
2019-08-08 | cpo |
| geometry-2019-05-06.txt | psana |
|
| Epix10ka2M | Currently the only Epix10ka2M that we have. Details about geometry can be found here. |
2017-06-29 | yoon | cxi10416 | cxi10416.geom | crystfel | CxiDs1.0 |
2016-09-29 | yoon | cxi11716 | cxi11716.geom | crystfel | CxiDs1.0 | Optimized using detector-shift | 2016-05-25 | dubrovin | from 05/25 |
| Based on dubrovin's psana geometry, tweaked x,y,z detector position with psocake to optimize indexing results. Prediction refine / geoptimization was NOT performed. |
2017-06-07 | dubrovin | cxi10416 | <PATHREPO>/ |
/reg/g/psdm/detector/alignment/cspad/calib-cxi- |
camera220160525CxiDs2CxiDs1.0:Cspad.0/geometry/ |
0-endgeometry-camera1-in-ds1-cxi10416-r0028.data | psana |
CxiDs2 Camera220160525New optical measurements from 2016-05-25. Quad positions age not alignedTuning with geo using cxi10416-r0028 NOTE: x and y tilt angles were applied |
2016- |
0525cxi06216 | cxij9415_v5.geom (crystfel) 22(psana)crystfel/Geometry file optimized using lysozyme by O. Yefanov using intor.psana | CxiDs1.0:Cspad.0 | Front |
Camera1_V16? | CrystFEL predrefine geometry converted to psana format using psgeom |
2016- |
0426cpocxil8416 | cxil8416_v2.geom (crystfel) cxil8416_v3.dat (psana) | crystfel/psanaFront | Camera2_V16_20160205 | psana translated from crystfel and moved -200um in x and -100um in y using geo to center lysozyme rings from runs 153,154,155 | Back |
| Valid from 21/Sep/16 |
2016-09-29 | yoon | cxi11716 | cxi11716.geom | crystfel | CxiDs1.0:Cspad.0 | Front |
| Optimized using detector-shift |
2016-05-25 | dubrovin | from 05/25 | <PATHREPO>/detector/alignment/cspad/calib-cxi-camera2-2016-05-25/calib/CsPad::CalibV1/ |
2016-04-12 | yoon | cxi06416 | 0-end.data | psana | CxiDg2.0:Cspad2x2.0 | Back | | Geometry file optimized using diffraction from a sphere. |
2016-02-27 | yoon | cxi02416 | cxi02416_400.geom | crystfel-cxidb | Front/geometry/0-end.data | psana | CxiDs2.0:Cspad.0 |
| Camera2_V16_ |
20160205Geometry file optimized using lysozyme. The xxx in cxi02416_xxx.geom represents the camera length. The detector was translated in x & y w.r.t powder ring and detector_shift script was used to correct for offset. | 20160525?
| New optical measurements from 2016-05-25. Quad positions age not aligned |
2016-05-25 | yoon | cxi06216 | cxij9415_v5.geom (crystfel) 22-end.data(psana) | crystfel/psana | CxiDs1.0:Cspad.0 | Front | Camera1_V16? | Geometry file optimized using lysozyme by O. Yefanov using intor. |
2016-04-26 | cpo | cxil8416 | cxil8416_v2.geom (crystfel) cxil8416_v3.dat (psana) | crystfel/psana | CxiDs2 |
2016-01-09 | yoon | cxic0915 | cxic0915_100.geom cxic0915_200.geom cxic0915_300.geom cxic0915_400.geom cxic0915_480.geom | crystfel-cxidb | CxiDs1Camera120140924The refined geometry file for detector calibration by Chuck Yoon. The xxx in cxic0915_xxx.geom represents the camera length. The detector was translated in x & y w.r.t powder ring at different detector distances. | 2015-12-22 | valerio | cxij9415 | cxij9415.geom | crystfel-cxidb | CxiDs1.0:Cspad.0 | Front | Camera1_V16_20140924 | The refined geometry file for LJ94 from Nadia Zatsepin. PI: Dominik Oberthuer Thanks to Yun-Xing Wang for the data used for the refinement
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2015-12-07 | yoon | cxic0915 | 20160205 | psana translated from crystfel and moved -200um in x and -100um in y using geo to center lysozyme rings from runs 153,154,155 |
2016-04-12 | yoon | cxi06416 | 0-end.data | psana | CxiDg2.0:Cspad2x2.0 | Back |
| Geometry file optimized using diffraction from a sphere. |
2016-02-27 | yoon | cxi02416 | cxi02416_400 |
cxic0915-v4CxiDs1Camera120140924The refined geometry file for detector calibration by Chuck Yoon. We thank Petra Fromme's team for the phycocynin sample. | 2015-11-12 | yoon | cxij4915 | cxij4915-v12.geom | crystfel-cxidb | CxiDs1.Camera220150120 L049 using Intor from Nadia Zatsepin. PI: Petra FrommePlease acknowledge Petra's team for the use of this geometry file in your research if you use any part of this geometry file. Do not remove the history section of the geom file.
detector calibration by Chuck Yoon. The xxx in cxic0915_xxx.geom represents the camera length. The detector was translated in x & y w.r.t powder ring at different detector distances. |
2015-12-22 | valerio | cxij9415 | cxij9415 |
2015-07-14 | valerio | cxih9615 | /reg/g/psdm/detector/alignment/cspad/openGeom/crystfel/
cxih9615_gv_v1CxiDs2 File from 2015-06-27 further refined using more data | The refined geometry file for LJ94 from Nadia Zatsepin. PI: Dominik Oberthuer Thanks to Yun-Xing Wang for the data used for the refinement
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2015-12-07 | yoon | cxic0915 | cxic0915-v4.geom | crystfel-cxidb | CxiDs1 |
2015-06-27 | valerio | cxih9615 | /reg/g/psdm/detector/alignment/cspad/openGeom/crystfel/ 2015-06-27-cxih9615.geom | crystfel-cxidb | CxiDs2 LH96 (Obertheuer beamtime)detector calibration by Chuck Yoon. We thank Petra Fromme's team for the phycocynin sample. |
2015- |
0602dubrovin/reg/g/psdm/detector/alignment/cspad/calib-cxi-camera1-2014-09-24/calib/CsPad::CalibV1/cxih8015 | /geometry/geometry-camera1-in-ds2-cxih8015-r176.datapsana | CxiDs2.0:Cspad.0 | | Camera120140924Generated from /reg/g/psdm/20150120 | The refined geometry file for L049 using Intor from Nadia Zatsepin. PI: Petra Fromme Please acknowledge Petra's team for the use of this geometry file in your research if you use any part of this geometry file. Do not remove the history section of the geom file. |
2015-07-14 | valerio | cxih9615 | <PATHREPO>/detector/alignment/cspad |
/calib-cxi-camera1-2014-09-24/2014-09-24-CSPAD-CXI-Camera1-Metrology-corr.txtGeometry file is deployed for cxi86715
2015-04-01 | valerio | cxii6315 | /reg/g/psdm/detector/alignment/cspad/openGeom/crystfel/ 2015- |
0401cxii6315-ds1CxiDs1Camera2 | 20150120 LI63 Zatsepin Mislabeled in openGeom folder
Caution: geoptimiser v0.6.0 has a bug which could have effected this geom file.
0326cpo | /reg/g/psdm/detector/alignment/cspad/calib-cxi-camera1-2014-09-24/calib/CsPad::CalibV1/CxiDs1.0:Cspad.0/geometry/ |
0-endgeometry-camera1-in-ds2-cxih8015-r176.data | psana |
CxiDs1 |
| Camera1_V16_20140924 | Generated from /reg/g/psdm/detector/alignment/cspad/calib-cxi-camera1-2014-09-24/2014-09-24-CSPAD-CXI-Camera1-Metrology |
.xlsx-corr.txt Geometry file is deployed for cxi86715 |
. No quad alignment.0326cpo reg/g/psdm//calib-cxi-camera2-2015-01-20/calib/CsPad::CalibV1/CxiDs2.0:Cspad.0/geometry/0-end.data psana | CxiDs2 | Generated from 2015-01-20-CSPAD-CXI-Camera2-Metrology.xlsx. No quad alignment | The refined geometry file for LI63 (Zatsepin beamtime) Mislabeled in openGeom folder Caution: geoptimiser v0.6.0 has a bug which could have effected this geom file. |
2015-03- |
25blaj dubrovin | | 2014-09-24-CSPAD-CXI-Camera1-Metrology.xlsx
/reg/g/psdm/detector/alignment/cspad/calib-cxi-camera1-2014-09-24 |
/2014-09-24-CSPAD-CXI-Camera1-Metrology.txtxlsx txt | | | 2015-01-20-optical metrology converted using calibman | 2015-03-25 | blaj dubrovin | | Camera2/reg/g/psdmtxttxt
| | Camera2_V16_20150120 | optical metrology converted using calibman |
2015-03- |
21valeriocxig0915 | /reg/g/psdm/detector/alignment/cspad/ |
openGeom/crystfel/2015-03-21-cxig0915-ds1.geom
crystfel-cxidb | CxiDs1.0:Cspad.0 | | The final refined | reggpsdm/detector/alignment/cspad/cspad/Dg4Cspad_ami_20141217_geo.1e000a00.dat | ami |
| |
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| Camera3_V16_20131009 | Need to copy over (permissions?) cp /reg/g/pcds/pds/cspadcalib/geo.1e000a00.dat /reg/g/psdm/detector/alignment/cspad/Dg4Cspad_ami_20141217_geo.1e000a00.dat |
Camera History
Camera1_V16_20140924
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- Metrology file:
- Out of vacuum camera typically used in XPP and XCS.
- 2014-12-17 -- Used in CXI at DG4 location in December 2014.
- XCS concentrator
- D50 MPOD power
- Detector quads rotated 90 deg
- src = 'DetInfo(CxiDg4.0:Cspad.0)'
- Relative detector Z position:
- alias = 'Dg4CsPad_z'
- pv = 'CXI:DG4:MMS:16.RBV '
References
Documentation on data formats
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MEC
NOTE: When a new geometry is available it is important for the MEC people to update the appropriate mecana file which has a list of "current" geometries. An example filename with this information is /reg/g/pcds/package/mecana/mecana-0.0.8/mecana/cspaddata.py
Geometries
/package/mecana/mecana-0.0.8/mecana/cspaddata.py
Geometries
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Date | Who uploaded | Experiment | Geometry File Name | File Type | DAQ "Source" Name (Ds1/Ds2) | Front/Back | Camera | Comment |
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2017-10-20 | dubrovin | valid after 2017/10/20 | <PATHREPO>/detector/alignment/cspad/calib-mec-2017-10-20/calib/CsPad::CalibV1/MecTargetChamber.0:Cspad.0/geometry/0-end.data | psana | MecTargetChamber.0:Cspad.0 |
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| Gabriel replaced two 2x2s in Q1 and all four in Q2. See details.
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2017-04-22 | dubrovin | valid after 04/22/217 | <PATHREPO>/detector/alignment/cspad/calib-mec-2017-04-22/calib/CsPad::CalibV1/MecTargetChamber.0:Cspad.0/geometry/1-end.data-2017-04-22-CSPAD-MEC-After | psana | MecTargetChamber.0:Cspad.0 |
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| New metrology for quads from Gabriel Blaj |
2017-04-22 | dubrovin | valid before 04/19/2017 | <PATHREPO>/detector/alignment/cspad/calib-mec-2017-04-22/calib/CsPad::CalibV1/MecTargetChamber.0:Cspad.0/geometry/0-end.data-2017-04-19-CSPAD-MEC-Before-corr | psana | MecTargetChamber.0:Cspad.0 |
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| New metrology for quads from Gabriel Blaj |
2016-04-21 | dubrovin | from 04/21 2016 | <PATHREPO>/detector/alignment/cspad/calib-mec-2016-04-21/calib/CsPad::CalibV1/MecTargetChamber.0:Cspad.0/geometry/0-end.data | psana | MecTargetChamber.0:Cspad.0 |
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2016-02-16 | dubrovin | from 02/16 to 04/21 2016 | <PATHREPO>/detector/alignment/cspad/calib-mec-2016-02-16/calib/CsPad::CalibV1/MecTargetChamber.0:Cspad.0/geometry/0-end.data | psana | MecTargetChamber.0:Cspad.0 |
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2015-12-14 |
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| <PATHREPO>/detector/alignment/cspad/calib-mec-2016-02-04/geo-2015-12-14.data | psana |
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XPP
Geometries
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Date | Who uploaded | Experiment | Geometry File Name | File Type | DAQ "Source" Name | Front/Back | Camera | Comment |
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2017-11-03 | dubrovin |
| <PATHREPO>/detector/alignment/cspad/calib-xpp-2017-11-03-camera3/calib/CsPad::CalibV1/XppGon.0:Cspad.0/geometry/0-end.data 2017-11-03-CSPAD-XPP-Camera3-Metrology.xlsx 2017-11-03-CSPAD-XPP-Camera3-Metrology.txt | psana | XppGon.0:Cspad.0 |
| Camera 3 | camera repaired, 2017-11-03 XPP CSPAD Camera3 Alignment |
2017-03-24 | cpo/dubrovin |
| <PATHREPO>/detector/alignment/cspad/calib-xpp-2016-08-22-camera3/calib/CsPad::CalibV1/XppGon.0:Cspad.0/geometry/0-end-corr-2017-03-24.data | psana | XppGon.0:Cspad.0 |
| Cspad | this corrected an error in the optical metrology measurements where the quads were measured in the wrong order, requiring a 90 degree rotation. This camera also moved to XCS and MFX in 2017. |
2016-11-22 | yoon | xppn3816 | xppn3816.geom, 21-end.data | crystfel / psana | XppEndstation.0:Rayonix.0 |
| Rayonix |
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2016-08-22 | dubrovin |
| <PATHREPO>/ |
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Date | Who uploaded | Experiment | Geometry File Name | File Type | DAQ "Source" Name (Ds1/Ds2) | Front/Back | Camera | Comment |
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2016-04-21 | dubrovin | from 04/21 2016 | /reg/g/psdm/detector/alignment/cspad/calib- |
mec0421camera3/calib/CsPad::CalibV1/ |
MecTargetChamberXppGon.0:Cspad.0/geometry |
/0-end.datapsana | MecTargetChamber | | |
| Camera 3 | applied to all experiments taken after August 19 , 2016 |
2013-10-09 |
2016-02-16from 02/16 to 04/21 2016 | /reg/g/psdm/mec20160216MecTargetChamberXppGon.0:Cspad.0/geometry/0-end.data | psana |
MecTargetChamber | | | 2015-12-14 | | | /reg/g/psdm/detector/alignment/cspad/calib-mec-2016-02-04/geo-2015-12-14.data | psana | | | | |
XPP
Geometries
MFX
Geometries
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Date | Who uploaded | Experiment | Geometry File Name | File Type | DAQ "Source" Name |
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(Ds1/Ds2)201608-22dubrovin | | /reg/g/psdm/detector/alignment/cspad/calib-xpp-2016-08-22-camera3/calib/CsPad::CalibV1/XppGon.0:Cspad.0/geometry/0-end.data | psana | 09-17 | yoon | mfxc00118 | 214-end.data mfxc00118.geom | psana / crystfel | MfxEndstation.0:Epix10ka2M.0 | epix10k2M |
| Epix10ka2M | Geometry based on lysozyme (indexing rate: 11%) and silver behenate |
See 2017-03-24 entry in XPP |
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2016-11-22 | yoon |
| mfx.geom 1-end.data | crystfel / psana | MfxEndstation.0:Rayonix.0 |
| Rayonix | Psana detector centred in x,y,z using psocake. Converted to crystfel geometry using psgeom. |
2017-02-21 | yoon | mfxn1116 | mfxn1116_v5a.geom | crystfel | MfxEndstation |
XppGon | | |
| Cspad | Geoptimized geometry courtesy of Oleksandr Yefanov. This was a Cspad borrowed from XPP. |
2020 |
201622blaj dubrovin | | 2016-08-22-CSPAD-XPP-Camera3-Metrology.xlsx 2016-08-22-CSPAD-XPP-Camera3-Metrology.txt | metrology | XppGon.0:Cspad.0 | | Camera 3 | applied to all experiments taken after August 19 , 2016 | 2013-10-09 | dubrovin | | /reg/g/psdm/detector/alignment/cspad/calib-xpp-2013-10-09/calib/CsPad::CalibV1/XppGon.0:Cspad.0/geometry/0-end.data | psana | XppGon.0:Cspad.0 | | | |
2013-10-09 | blaj dubrovin | | 2013-10-09-CSPAD-XPP-Metrology.xlsx 2013-10-09-CSPAD-XPP-Metrology.txt | metrology | XppGon.0:Cspad.0 | | Camera 3 | |
25 | yoon | mfxc00318 | 1-end.data | psana | MfxEndstation.0:Epix10ka2M.0 | epix10k2M |
| Epix10ka2M | Recentered on lysozyme rings using Psocake |
2021-05-17 | cpo/brewster | mfxlv4318 | epix_run23.expt | dials | epix10k2M |
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| From /reg/d/psdm/mfx/mfxlv4318/results/common/geom/epix_run23.expt |
AMO
Geometries
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Date | Who uploaded | Experiment | Geometry File Name | File Type | DAQ "Source" Name | Front/Back | Camera | Comment |
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2017-06-16 | yoon |
| pnccd-jun16-v1.geom | crystfel |
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| pnCCD | Optimized with hdfsee |
References
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