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Starting with ana-0.18.0 (release April 28 2016), the recommended way to submit MPI batch jobs is
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bsub
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-q
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psanaq
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-n
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32
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-o
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~/output/%J.out
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mpirun ~/bin/hello
as opposed to:
bsub -q psanaq -a mympi -n 32 -o ~/output/%J.out ~/bin/hello
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this This will submit an OpenMPI job requesting 32 processors (-n 32) to the psanaq batch queue (-q psanaq). The environment variable SIT_RELEASE shows you the ana release number.
Prior to ana-0.18.0, one submits a MPI batch job as follows:
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.
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You can still use the -a mympi option for ana 0.18.0 and later, however the recommended method with mpirun should make batch job management more robust (it uses the official LSF batch systems modules).
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