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Code Block
g2(tau) = <I(t)*I(t+tau)> / (<I(t)> * <I(t+tau)>),

where I(t) is an image intensity at time t, and tau is a delay between two measurements.
Typical experimental condition can be described as follows:

  • Run duration is about one hour at frequency up to 120 Hz that gives up to 10^5^10^5-10^6^ 10^6 images.
  • Currently typical imaging devise is a Princeton camera with 1300x1340 pixels.
  • Need to calculate g2(tau) for each pixel, averaged over all possible image times t with time difference tau between images.
  • A set of tau should have about 30-100 points in log scale uniformly covering the run duration.
  • Use for example xcsi0112-r0015: 500 images with 8 sec delay between images.
    Desired time for evaluation of the auto-correlation function should be comparable with run duration ~<1 <1 hour. Currently this algorithm takes a few hours that can not be used for fast feedback in real time experiment.

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Basic idea is (1) to split image vs time for small parts in image, (2) to process each part on separate computer node, (3) to merge results at the end of processing. It is clear that significant speedup (about T/N~nodes~N_nodes_) is achieved at the 2nd stage. These three stages are performed in separate C++ applications. Wrapping python script allows to submit job by a single command. It takes care about file and sub-process management in this job, as described below.

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Code Block
img-xcs-r0015-tau.txt          - string of {{tau}} values for which the auto-correlation function is evaluated
img-xcs-r0015-b0000-result.bin - auto-correlators for the part of the image for all {{tau}} values 
img-xcs-r0015-b0001-result.bin
img-xcs-r0015-b0002-result.bin
img-xcs-r0015-b0003-result.bin
img-xcs-r0015-b0004-result.bin
img-xcs-r0015-b0005-result.bin
img-xcs-r0015-b0006-result.bin
img-xcs-r0015-b0007-result.bin

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  • File with split-image data for selected events img-xcs-r0015-b000N.bin:
    Currently this file contains <uint16_t> amplitude for each pixel in binary format for:
    Code Block
    <data-for-img-partN-of-img1> <data-for-img-partN-of-img2> ... <data-for-img-partN-of-imgLast> 
    
  • File with metadata parameters img-xcs-r0015-med.txt:
    Code Block
    IMAGE_ROWS      1300
    IMAGE_COLS      1340
    IMAGE_SIZE      1742000
    NUMBER_OF_FILES 8
    BLOCK_SIZE      217750
    REST_SIZE       0
    NUMBER_OF_IMGS  500
    FILE_TYPE       bin
    DATA_TYPE       uint16_t
    TIME_SEC_AVE    8.088413
    TIME_SEC_RMS    0.063639
    TIME_INDEX_MAX       499
    
  • File with image time records img-xcs-r0015-time.txt:
    Code Block
         1        0.000000  0.000000  20120616-080236.671607864    5366      0
         2        8.026429  8.026429  20120616-080244.698036743    8255      1
         3       16.144788  8.118359  20120616-080252.816395836   11177      2
         4       24.154835  8.010048  20120616-080300.826443448   14060      3
        ...
    
    where each record has:
    Code Block
    <image-in-file#> <t(sec)-from-the-1st-event> <dt(sec)> <time-stamp> <fiducials> <event#-since-configure>
    
  • File with image time records and evaluated time index img-xcs-r0015-time-ind.txt:
    Code Block
         1        0.000000  0.000000  20120616-080236.671607864    5366      0        0 
         2        8.026429  8.026429  20120616-080244.698036743    8255      1        1 
         3       16.144788  8.118359  20120616-080252.816395836   11177      2        2 
         4       24.154835  8.010048  20120616-080300.826443448   14060      3        3 
         5       32.281937  8.127102  20120616-080308.953545010   16985      4        4 
        ...
    
    where each record has:
    Code Block
    <image-in-file#>  <t(sec)-from-the-1st-event> <dt(sec)> <time-stamp> <fiducials> <event#-since-configure> <time-index-starting-from-0>
    
  • File with split-image correlators for each value of tau img-xcs-r0015-b000N-result.bin:
    Currently it saves <float> correlator for each pixel in binary format for:
    Code Block
    <corr-for-img-partN-of-tau1> <corr-for-img-partN-of-tau2> ... <corr-for-img-partN-of-tauLast> 
    
  • my-tau.txt:
    Code Block
     1 3 5 7 9 10 12 14 16 18 20 24 28 30 32 36 40 ... 160 180 200 240 280 300 320 360 400
    
    contains the tau values presented in terms of number of ordered images in the file.