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Nagios has extensive documentation available online (we are using Nagios 3.2.3) Nagios Core Version 3.x Documentation and Nagios Documentation (Library, Guides and Links)
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Nagios is a network, and system, monitoring application. Essentially, Nagios watches specified hosts, and services, then alerts you when something goes wrong. Slac nagios is currently using Nagios core 3.2.3
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All the configuration files for Scientific Computing reside under /etc/nagios/sca/ on nagios02.slac.stanford.edu. Within this directory are a number of subdirectories on a per-monitoring-type basis. These are:
Within these directories are at least two files, a host.cfg (list of hosts and host groups) and a service.cfg (listing services and service groups). Inheritance is heavily used in order to avoid writing the same service checks or host directives repeatedly for each individual host. A generic template of basic services (e.g. ping, ssh) is inherited by all host files first and then the specific service directives are added on top of that.