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Optical measurements

Comments from Gabriel Blaj:

Metrology file for CXI-Camera2-V16-20160205, replacing CXI-Camera2-V16-20150120, for all experiments taking place on or after February 05, 2016.
The only changes from the previous version are Quads 0 and 1.

Metrology files:

Quality check in X-Y plane

segm:        S1      S2     dS1     dS2        L1      L2     dL1     dL2    angle(deg)   D1      D2      dD   d(dS)   d(dL)

Quad  0
segm: 0  -20912  -20948      27      -9     43547   43552      -4       1    0.01184   48312   48323     -11      36      -5
segm: 1  -20879  -20913     115      81     43550   43548      36      34    0.12893   48292   48313     -21      34       2
segm: 2  -20917  -20919     -47     -49    -43551  -43547      24      28   -0.06315   48309   48314      -5       2      -4
segm: 3  -20959  -20925    -150    -116    -43550  -43549      52      53   -0.17498   48333   48313      20     -34      -1
segm: 4   20910   21118     -99     109    -43545  -43547     -48     -50   -0.00658   48397   48305      92    -208       2
segm: 5   20920   20907      -8     -21    -43556  -43566     -11     -21    0.01907   48329   48314      15      13      10
segm: 6  -20941  -20940     -39     -38    -43574  -43510     -44      20   -0.05066   48343   48288      55      -1     -64
segm: 7  -20915  -21020      97      -8    -43562  -43549      -3      10    0.05854   48317   48362     -45     105     -13

Quad  1
segm: 0  -20916  -20912    -109    -105     43549   43548     -48     -49   -0.14078   48312   48307       5      -4       1
segm: 1  -20916  -20917      -6      -7     43547   43225      -5    -327   -0.00858   48018   48311    -293       1     322
segm: 2  -20936  -20927      31      40    -43568  -43541     -30      -3    0.04670   48322   48324      -2      -9     -27
segm: 3  -20950  -20919      68      99    -43608  -43545     -74     -11    0.10979   48346   48342       4     -31     -63
segm: 4   20965   20753      19    -193    -43560  -43549     -10       1    0.11445   48258   48325     -67     212     -11
segm: 5   20934   20913      33      12    -43551  -43570      32      13   -0.02959   48314   48335     -21      21      19
segm: 6  -20927  -20919      95     103    -43570  -43578     -42     -50    0.13018   48335   48338      -3      -8       8
segm: 7  -20941  -21387     386     -60    -43570  -43547      20      43    0.21441   48328   48527    -199     446     -23

This check for original metrology file shows a few problems with 

  • Quad 0, segments 4 and 7
  • Quad 1, segments 1, 4, and 7

Corrections

Quad 0:

  • segment 4: point 18 Y: 67674 -> 67466
  • segment 7: point 28 X: 65321 -> 65216

Quad 1:

  • segment 1: point 4 X: 43224 -> 43546
  • segment 4: point 18 Y: 67604 -> 67816
  • segment 7: point 28 Y: 65798 -> 65352

Quality check in X-Y plane for corrected data

segm:        S1      S2     dS1     dS2        L1      L2     dL1     dL2    angle(deg)   D1      D2      dD   d(dS)   d(dL)

Quad  0
segm: 0  -20912  -20948      27      -9     43547   43552      -4       1    0.01184   48312   48323     -11      36      -5
segm: 1  -20879  -20913     115      81     43550   43548      36      34    0.12893   48292   48313     -21      34       2
segm: 2  -20917  -20919     -47     -49    -43551  -43547      24      28   -0.06315   48309   48314      -5       2      -4
segm: 3  -20959  -20925    -150    -116    -43550  -43549      52      53   -0.17498   48333   48313      20     -34      -1
segm: 4   20910   20910     -99     -99    -43545  -43547     -48     -50    0.13026   48307   48305       2       0       2
segm: 5   20920   20907      -8     -21    -43556  -43566     -11     -21    0.01907   48329   48314      15      13      10
segm: 6  -20941  -20940     -39     -38    -43574  -43510     -44      20   -0.05066   48343   48288      55      -1     -64
segm: 7  -20915  -20915      -8      -8    -43562  -43549      -3      10   -0.01052   48317   48316       1       0     -13

Quad  1
segm: 0  -20916  -20912    -109    -105     43549   43548     -48     -49   -0.14078   48312   48307       5      -4       1
segm: 1  -20916  -20917      -6      -7     43547   43547      -5      -5   -0.00855   48308   48311      -3       1       0
segm: 2  -20936  -20927      31      40    -43568  -43541     -30      -3    0.04670   48322   48324      -2      -9     -27
segm: 3  -20950  -20919      68      99    -43608  -43545     -74     -11    0.10979   48346   48342       4     -31     -63
segm: 4   20965   20965      19      19    -43560  -43549     -10       1   -0.02499   48349   48325      24       0     -11
segm: 5   20934   20913      33      12    -43551  -43570      32      13   -0.02959   48314   48335     -21      21      19
segm: 6  -20927  -20919      95     103    -43570  -43578     -42     -50    0.13018   48335   48338      -3      -8       8
segm: 7  -20941  -20941     -60     -60    -43570  -43547      20      43   -0.07892   48328   48333      -5       0     -23

Quad  2
segm: 0  -20944  -20953      91      82     43586   43585      40      39    0.11371   48356   48360      -4       9       1
segm: 1  -20973  -20937    -121     -85     43574   43547     -53     -80   -0.13548   48323   48354     -31     -36      27
segm: 2  -20911  -20953      10     -32    -43566  -43572      -7     -13   -0.01447   48350   48322      28      42       6
segm: 3  -20908  -20909     -52     -53    -43544  -43546      27      25   -0.06908   48303   48305      -2       1       2
segm: 4   20947   20911      58      22    -43547  -43547       9       9   -0.05263   48324   48306      18      36       0
segm: 5   20917   20911     -86     -92    -43548  -43554     -38     -44    0.11709   48310   48314      -4       6       6
segm: 6  -20908  -20907      66      67    -43545  -43572     -26     -53    0.08747   48323   48309      14      -1      27
segm: 7  -20913  -20909     -46     -42    -43483  -43480      23      26   -0.05798   48245   48251      -6      -4      -3

Quad  3
segm: 0  -21001  -20956      83     128     43541   43568      63      90    0.13878   48366   48320      46     -45     -27
segm: 1  -20906  -20904       0       2     43562   43543      19       0    0.00132   48318   48301      17      -2      19
segm: 2  -20932  -20909     -38     -15    -43544  -43576      22     -10   -0.03486   48329   48317      12     -23      32
segm: 3  -20934  -20904    -158    -128    -43550  -43552      63      61   -0.18813   48320   48308      12     -30       2
segm: 4   20912   20949     -69     -32    -43545  -43549     -44     -48    0.06644   48335   48297      38     -37       4
segm: 5   20938   20934    -157    -161    -43558  -43544     -87     -73    0.20918   48325   48319       6       4     -14
segm: 6  -20913  -20911    -150    -148    -43544  -43546      72      70   -0.19605   48306   48305       1      -2       2
segm: 7  -20921  -20918     -78     -75    -43541  -43552      39      28   -0.10065   48313   48307       6      -3      11

Quality check in Z

segm:        SA      LA   XSize   YSize    dZS1  dZS2  dZL1  dZL2    dZSA  dZLA  ddZS  ddZL     dZX   dZY   angXZ(deg) angYZ(deg) dz3(um)

Quad  0
segm: 0  -20930   43549   43549   20930     -64   -10  -100   -46     -37   -73   -54   -54     -73   -37  -0.09604   -0.10129     54.115
segm: 1  -20896   43549   43549   20896      -8    51   -55     4      21   -25   -59   -59     -25    21  -0.03289    0.05758     59.013
segm: 2  -20918  -43549   20918   43549     -25    -4   -15     6     -14    -4   -21   -21     -14    -4  -0.03835   -0.00526    -21.001
segm: 3  -20942  -43549   20942   43549      50    30    48    28      40    38    20    20      40    38   0.10944    0.05000     19.951
segm: 4   20910  -43546   43546   20910      28   119   -76    15      73   -30   -91   -91     -30    73  -0.03947    0.20003     91.002
segm: 5   20913  -43561   43561   20913      33   406  -351    22     219  -164  -373  -373    -164   219  -0.21571    0.59998    373.251
segm: 6  -20940  -43542   20940   43542      51    53  -125  -123      52  -124    -2    -2      52  -124   0.14228   -0.16317     -1.821
segm: 7  -20915  -43555   20915   43555      24    37   -39   -26      30   -32   -13   -13      30   -32   0.08218   -0.04210    -12.992

Quad  1
segm: 0  -20914   43548   43548   20914    -116    41   -41   116     -37    37  -157  -157      37   -37   0.04868   -0.10136    156.978
segm: 1  -20916   43547   43547   20916      23    48    75   100      35    87   -25   -25      87    35   0.11447    0.09588     24.999
segm: 2  -20931  -43554   20931   43554     -24    -9   172   187     -16   179   -15   -15     -16   179  -0.04380    0.23548    -15.112
segm: 3  -20934  -43576   20934   43576     -12   -18   223   217     -15   220     6     6     -15   220  -0.04105    0.28926      5.713
segm: 4   20965  -43554   43554   20965     -60   -43   -45   -28     -51   -36   -17   -17     -36   -51  -0.04736   -0.13938     16.989
segm: 5   20923  -43560   43560   20923     -29    69  -117   -19      20   -68   -98   -98     -68    20  -0.08944    0.05477     98.119
segm: 6  -20923  -43574   20923   43574      42    19    56    33      30    44    23    23      30    44   0.08215    0.05786     22.999
segm: 7  -20941  -43558   20941   43558     -54   -21    19    52     -37    35   -33   -33     -37    35  -0.10123    0.04604    -33.027

Quad  2
segm: 0  -20948   43585   43585   20948       0     0     0     0       0     0     0     0       0     0   0.00000    0.00000      0.000
segm: 1  -20955   43560   43560   20955       0     0     0     0       0     0     0     0       0     0   0.00000    0.00000      0.000
segm: 2  -20932  -43569   20932   43569       0     0     0     0       0     0     0     0       0     0   0.00000    0.00000      0.000
segm: 3  -20908  -43545   20908   43545       0     0     0     0       0     0     0     0       0     0   0.00000    0.00000      0.000
segm: 4   20929  -43547   43547   20929       0     0     0     0       0     0     0     0       0     0   0.00000    0.00000      0.000
segm: 5   20914  -43551   43551   20914       0     0     0     0       0     0     0     0       0     0   0.00000    0.00000      0.000
segm: 6  -20907  -43558   20907   43558       0     0     0     0       0     0     0     0       0     0   0.00000    0.00000      0.000
segm: 7  -20911  -43481   20911   43481       0     0     0     0       0     0     0     0       0     0   0.00000    0.00000      0.000

Quad  3
segm: 0  -20978   43554   43554   20978      76    -1   -48  -125      37   -86    77    77     -86    37  -0.11313    0.10106    -76.759
segm: 1  -20905   43552   43552   20905     -27   -21   -48   -42     -24   -45    -6    -6     -45   -24  -0.05920   -0.06578      5.979
segm: 2  -20920  -43560   20920   43560      22    25   -30   -27      23   -28    -3    -3      23   -28   0.06299   -0.03683     -3.047
segm: 3  -20919  -43551   20919   43551      26     5   -31   -52      15   -41    21    21      15   -41   0.04108   -0.05394     20.991
segm: 4   20930  -43547   43547   20930      63   239  -265   -89     151  -177  -176  -176    -177   151  -0.23288    0.41335    175.587
segm: 5   20936  -43551   43551   20936      56    59   -61   -58      57   -59    -3    -3     -59    57  -0.07762    0.15599      2.992
segm: 6  -20912  -43545   20912   43545      23    15   -68   -76      19   -72     8     8      19   -72   0.05206   -0.09474      7.995
segm: 7  -20919  -43546   20919   43546       7    -5   -48   -60       1   -54    12    12       1   -54   0.00274   -0.07105     11.986 

Constants

(tick) Archive: /reg/g/psdm/detector/alignment/cspad/calib-cxi-camera2-2016-02-05/calib/CsPad::CalibV1/CxiDs2.0:Cspad.0/geometry/1-end.data

(tick) first deployed as /reg/d/psdm/CXI/cxi01516/calib/CsPad::CalibV1/CxiDs2.0:Cspad.0/geometry/1-end.data

Quads alignment

2016-02-18 Alignment using Ag-behenate

Use Ag-behenate data of cxi01516 runs 21-23

Start with new optical measurements in /reg/g/psdm/detector/alignment/cspad/calib-cxi-camera2-2016-02-05/

Commands:

# get averaged data
det_ndarr_average -d exp=cxi01516:run=21 -s CxiDs2.0:Cspad.0 -f nda-cspad-Ag-behenate -n 10000 -p -v

# tune geometry
geo -g geo-cxi01516-2016-02-05.data -i nda-cspad-cxi01516-r0022-e010000-CxiDs2-0-Cspad-0-ave-Ag-behenate.txt -x 1000 -y 1000 &


Archive: calib/CsPad::CalibV1/CxiDs2.0:Cspad.0/geometry/geo-cxi01516-2016-02-18-Ag-behenate-tuned.data

Essential constants:

CSPAD:V1      0 QUAD:V1       0     -5100    -3000        0    90.0    0.0    0.0   0.00000  0.00000  0.00000
CSPAD:V1      0 QUAD:V1       1     -2800     6350        0     0.0    0.0    0.0   0.00000  0.00000  0.00000
CSPAD:V1      0 QUAD:V1       2      6350     4800        0   270.0    0.0    0.0   0.00000  0.00000  0.00000
CSPAD:V1      0 QUAD:V1       3      4800    -4900        0   180.0    0.0    0.0   0.00000  0.00000  0.00000
RAIL          0 CSPAD:V1      0     -1300    -3000  1000000     0.0    0.0    0.0   0.00000  0.00000  0.00000
IP            0 RAIL          0         0        0        0     0.0    0.0    0.0   0.00000  0.00000  0.00000

2016-03-11 Alignment using combination of runs

All files are located under directory: /reg/g/psdm/detector/alignment/cspad/calib-cxi-camera2-2016-02-05

Stage 1

Use very good Ag-behenate data cxi01516-r0022 and align all quads using this sample.

  • geo -x1000 -y1000 -g geo-cxi01516-2016-02-18.data -i nda-Ag-behenate-Z200-cxi01516-r0022-e012320-CxiDs2-0-Cspad-0-max.txt
  • create geometry file: geo-cxi01516-r0022-2016-03-11.txt
  • images:

 

 


At further stages only minor (≤ 1pixel) quad corrections were applied

Stage 2

Use bright lysozyme data from run cxi01516-r0026

  • geo -x1000 -y1000 -g geo-cxi01516-r0022-2016-03-11.txt -i nda-lysozyme-cxi01516-r0026-e093480-CxiDs2-0-Cspad-0-max.txt
  • move entire detector, create geometry file geo-cxi01516-r0026-2016-03-11.txt
  • images:

 

Stage 3

Use nozzle-ring data from run cxi02416-r0008

  • geo -x1000 -y1000 -g geo-cxi01516-r0026-2016-03-11.txt -i nda-nozzle-ring-cxi02416-r0008-e069865-CxiDs2-0-Cspad-0-max.txt
  • move entire detector, create geometry file geo-cxi02416-r0008-2016-03-11.txt
  • image:

 

 

Stage 4

Use barely seen lysozyme data  from run me-cxi02416-r0010

  •  geo -x1000 -y1000 -g geo-cxi02416-r0008-2016-03-11.txt -i nda-lysozyme-cxi02416-r0010-e052421-CxiDs2-0-Cspad-0-max.txt
  • move entire detector, create geometry file geo-cxi02416-r0010-2016-03-11.txt 
  • image:

Alignment conclusion:

  • Quad alignment obtained with nda-Ag-behenate run cxi01516-r0022 works fine with all other data
  • For each other data-set, if detector was moved its position needs to be re-aligned.

Further cross-check

  • use geo-cxi02416-r0010-2016-03-11.txt and apply Oleksandr's geometry correction
  • check corrected geometry with cxi01516 run22 and 26

References

 

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