The documented method to build a Singularity container image requires using sudo privilege. In the how-to document, we outline how to work with this constraint. Obviously if you have sudo somewhere that you can use to build a Singularity container image, your problem is solved. For those who don't, here are some of the options:

  1. Install an Oracle Virtual Box on your desktop or laptop. You can them install your own Linux virtual machine with the Singularity rpm, giving yourself root/sudo privilege on that VM. This will allows you to build an image. The solution works for both Windows, Mac and Linux desktop/laptop.
  2. Similarly, one can install Docker on your desktop or laptop. The install / pull a Linux Docker container and install Singularity rpm in the container. The rest is the same as above.
  3. Build what you need in a Docker image and upload to Docker Hub, and on a SLAC Linux host, use command "singularity pull your_docker_image" to convert and save it as a Singularity image.

If you want to do none of the above, you have an option to build a Singularity container image without root on a SLAC CentOS 7 machine. This method is a bit of hacking so it may not work in the future when Singularity make significant changes. The follows are the steps to do this, assuming you are on a SLAC CentOS 7 public login node, you current directory is /tmp, and you want to build a CentOS based Singularity container image:

singularity pull docker://centos:centos7.7.1908

singularity sif dump 3 /tmp/centos_centos7.7.1908.sif > /tmp/centos_centos7.7.1908.sqsh

/bin/unsquashfs \-no-xattrs /tmp/centos_centos7.7.1908.sqsh

cd /tmp/squashfs-root; find usr bin lib* etc root var -type d -exec chmod u+w {} \;

 

def checkRootUID(base):
    """Verify that the program is being run by the root user.

    :param base: a :class:`yum.Yumbase` object.
    :raises: :class:`cli.CliError`
    """
    # if base.conf.uid != 0:
    # base.logger.critical(_('You need to be root to perform this command.'))
    # raise cli.CliError

 

singularity shell /tmp/squashfs-root

singularity exec \-w --no-home /tmp/squashfs-root yum install git

 

 

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