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Rsync can be used over ssh to bulk transfer/synchronise data across different locations. Please use dtn02 The Data tranfer nodes (dtn01.slac.stanford.edu and dtn02.slac.stanford.edu has been deprecated as of January 2024. Please use centos7.slac.stanford.edu for this purpose.
Globus
One can create a free Globus account at https://globusonline.org. From there, one can download a local client (Globus Connect Personal) so that files may be copied to say your laptop, or staged to another Globus Endpoint that your institution may run.
The Endpoint for SLAC CryoEM's data is at slac#cryoem.You should use your SLAC Unix Account as credentials to log into slac#cryoem endpoint (once you have a globus ID).Globus 4 endpoint at slac#cryoem is no longer supported.(Globus shut down all version 4 endpoints worldwide on December 18th 2023).
There is a new Globus v5 instance running but is currently (as of Feb 2024) only available to S3DF users. Email your microscope support contact for an invitation to join S3DF (the new cluster), once you accept and complete your registration at coact.slac.stanford.edu, you should be able to access the slac_globus5_test endpoint from globus.org. You will be asked to choose an idP (identity provider), you should be able to log in using your SLAC unix credentials to either option. The Cryo-EM data is mounted on that endpoint at:
/fs/ddn/sdf/group/cryoem/exp/
SAMBA
If you are onsite at SLAC, you can access the data via samba/cifs. You should connect to zslaccfs in order to browse the global directory. From there you can access the cryo-EM disks under cryoem.
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