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For generic advice on running in batch, see Running on SLAC Central Linux.  Note that the actual batch system has changed and we have not updated the doc to reflect that. This is advice on copying data to local scratch, etc.

• LSB_JOBID -> SLURM_JOB_ID
• scratch space during job execution:
  • at job start, a directory is automatically created on the scratch of the worker: ${LSCRATCH} = /lscratch/${USER}/slurm_job_id_${SLURM_JOB_ID}
  • once all of a user's jobs on a node are completed/exited, their corresponding LSCRATCH directory on that host is deleted.

You need to specify an account and "repo" on your slurm submissions. The repos allow subdivision of our allocation to different uses. There are 4 repos available under the fermi account. The format is "–-account fermi:<repo>" where repo is one of:

• default (jobs are pre-emptible - if "paying jobs" need slots, pre-emptible jobs will be killed)
• L1
• other-pipelines
• Users users 

L1 and other-pipelines are restricted to known pipelines. Non-default repos have quality of service (qos) defaulting to normal (non-pre-emptible).

At time of writing, there is no accounting yet. When that is enabled, we'll have to decide how to split up our allocation into the various repos.