Page History
Table of Contents maxLevel 2
NOTE: if you want to run ami2 on LCLS1 data, you can do it by generating an h5 file with the LCLS1 MPIDataSource.
...
For examples that load a predefined graph (.fc file, for "flow chart") you should see a window like this, while examples with no .fc file will have an empty area in the upper right:
TMO Examples
...
- waveform viewing, ROI, integration and normalization of peak area
- waveform peak finding, histogramming, and scaling of axes using a polynomial "calibration"
Code Block |
---|
ami-local -l /reg/g/psdm/tutorials/ami2/tmo/run43.fc hdf5:///reg/g/psdm/tutorials/ami2/tmo/run43.json |
Cookiebox example
...
Code Block |
---|
ami-local hdf5:///reg/g/psdm/tutorials/ami2/tmo/amoi0314_run167.json ami-local hdf5:///reg/g/psdm/tutorials/ami2/tmo/amoi0314_run171.json ami-local hdf5:///reg/g/psdm/tutorials/ami2/tmo/amoi0314_run172.json ami-local hdf5:///reg/g/psdm/tutorials/ami2/tmo/amo86815_run37.json ami-local hdf5:///reg/g/psdm/tutorials/ami2/tmo/amo86815_run70.json ami-local hdf5:///reg/g/psdm/tutorials/ami2/tmo/amo86815_run71.json ami-local hdf5:///reg/g/psdm/tutorials/ami2/tmo/amo86815_run72.json json |
Quadanode example
...
Code Block |
---|
ami-local -l /reg/g/psdm/tutorials/ami2/tmo/amox27716-r0100.fc ami-local hdf5:///reg/g/psdm/tutorials/ami2/tmo/amox27716_run78.json ami-local hdf5:///reg/g/psdm/tutorials/ami2/tmo/amox27716_run100.json |
POP example
...
Code Block |
---|
ami-local -l /reg/g/psdm/tutorials/ami2/tmo/pop.fc |
Peakfinder example
...
Code Block |
---|
ami-local -l /reg/g/psdm/tutorials/ami2/tmo/amox27716_run100.fc |
XTCAV example
...
Code Block |
---|
ami-local -l /reg/g/psdm/tutorials/ami2/tmo/amox23616_run137.fc |
Timetool example
...
Code Block |
---|
ami-local -l /reg/g/psdm/tutorials/ami2/tmo/amo64913_run185.fc |
RIX
...
Examples
Example includes:
- photon centroid finding on vertically binned Andor camera
- linearity check of normalization (andor camera intensity vs. acqiris waveform intensity) with pearson-R calculation as a function of time
Code Block |
---|
ami-local -l /reg/g/psdm/tutorials/ami2/neh2.2/run22.fc hdf5:///reg/g/psdm/tutorials/ami2/neh2.2/worker.json |
Example includes:
- Plot of integration of acqiris vs delay stage
Code Block |
---|
ami-local -l /reg/g/psdm/tutorials/ami2/neh2.2/sxrlr2916_run37.fc |
...
Example includes:
- 1d ROI of Andor
- Normalization of ROI by integration of acqiris
Code Block |
---|
ami-local -l /reg/g/psdm/tutorials/ami2/neh2.2/sxrlr2916_run23.fc |
Example includes:
- Ratio of peak area and export over EPICS
Code Block |
---|
ami-local -e ami -l /reg/g/psdm/tutorials/ami2/neh2.2/sxrlq7615_run176.fc pvlist localhost:5075 pvget ami:ana:graph:data:peak_area |
...
XPP Example
Code Block |
---|
ami-local hdf5:///reg/g/psdm/tutorials/ami2/xpp/xpp.json |
Random Data
...
Examples
Calculator example
Example includes:
...
Code Block |
---|
ami-local -l /reg/g/psdm/tutorials/ami2/random/calculator.fc random:///reg/g/psdm/tutorials/ami2/random/worker.json |
Complex example
Example includes:
- binning based on conditional logic
...
Overview
Content Tools