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[psana] files = /reg/d/psdm/<instrument>/<experiment>/xtc/<file-name-1>.xtc events = 5 modules = cspad_mod.CsPadCalib CSPadPixCoords.CSPadImageProducer CSPadPixCoordsImgAlgos.SaveImageInFileImgSaveInFile [cspad_mod.CsPadCalib] inputKey = outputKey = calibrated doPedestals = yes doPixelStatus = no doCommonMode = no #[CSPadPixCoords.CSPadInterpolImageProducer] [CSPadPixCoords.CSPadImageProducer] calibDir = /reg/d/psdm/<instrument>/<experiment>/calib typeGroupName = CsPad::CalibV1 source = CxiDs1.0:Cspad.0 key = calibrated imgkey = Image2D tiltIsApplied = true [CSPadPixCoordsImgAlgos.SaveImageInFileImgSaveInFile] source = CxiDs1.0:Cspad.0 #eventSave = 1 saveAll = true |
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[psana] files = /reg/d/psdm/<instrument>/<experiment>/xtc/<file-name-1>.xtc events = 5 modules = CSPadPixCoords.CSPad2x2ImageProducer CSPadPixCoordsImgAlgos.SaveImageInFileImgSaveInFile [CSPadPixCoords.CSPad2x2ImageProducer] source = DetInfo(:Cspad2x2) inkey = outimgkey = Image tiltIsApplied = true print_bits = 15 [CSPadPixCoordsImgAlgos.SaveImageInFileImgSaveInFile] source = DetInfo(:Cspad2x2) key = Image fname = cspad2x2 saveAll = true #eventSave = 5 |
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[psana]
files = /reg/d/psdm/<instrument>/<experiment>/xtc/<file-name-1>.xtc \
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/reg/d/psdm/<instrument>/<experiment>/xtc/<file-name-N>.xtc
events = 1000
experiment = cxii0212
calib-dir = ana-cxii0212/calib
modules = cspad_mod.CsPadCalib \
ImgAlgos.CSPadMaskApply \
CSPadPixCoords.CSPadImageProducer \
ImgAlgos.ImgPeakFinder \
ImgAlgos.ImgPeakFilter \
ImgAlgos.SaveImageInFileImgSaveInFile:1
[cspad_mod.CsPadCalib]
inputKey =
outputKey = calibrated
doPedestals = yes
doPixelStatus = no
doCommonMode = yes
[ImgAlgos.CSPadMaskApply]
source = DetInfo(CxiDs1.0:Cspad.0)
inkey = calibrated
outkey = masked_arr
mask_fname = <your-local-directory>/<mask-file-name>.dat
masked_amp = 0
print_bits = 5
mask_control_bits = 15
[CSPadPixCoords.CSPadImageProducer]
calibDir = /reg/d/psdm/<instrument>/<experiment>/calib
typeGroupName = CsPad::CalibV1
source = CxiDs1.0:Cspad.0
key = masked_arr
imgkey = img
print_bits = 0
#tiltIsApplied = true
[ImgAlgos.ImgPeakFinder]
source = DetInfo(CxiDs1.0:Cspad.0)
key = img
peaksKey = peaks
threshold_low = 2
threshold_high = 5
sigma = 1.5
smear_radius = 5
peak_radius = 7
xmin = 20
xmax = 1700
ymin = 20
ymax = 1700
#testEvent = 5
print_bits = 3
#finderIsOn = true
[ImgAlgos.ImgPeakFilter]
source = DetInfo(CxiDs1.0:Cspad.0)
key = peaks
threshold_peak = 5
threshold_total= 0
n_peaks_min = 10
print_bits = 11
fname = cspad-img
selection_mode = SELECTION_ON
[ImgAlgos.SaveImageInFileImgSaveInFile:1]
source = CxiDs1.0:Cspad.0
key = img
fname = cspad-img
#eventSave = 1
saveAll = true
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Example for Module ImgAlgos
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.ImgSaveInFile
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modules = ... ImgAlgos.SaveImageInFileImgSaveInFile:1 ... [ImgAlgos.SaveImageInFileImgSaveInFile:1] source = DetInfo(:Opal1000) # or CxiDs1.0:Cspad.0 key = img fname = my-img #eventSave = 5 saveAll = true |
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[psana]
files = /reg/d/psdm/<instrument>/<experiment>/xtc/<file-name-1>.xtc \
/reg/d/psdm/<instrument>/<experiment>/xtc/<file-name-2>.xtc \
...
/reg/d/psdm/<instrument>/<experiment>/xtc/<file-name-N>.xtc
skip-events = 500
events = 10
modules = cspad_mod.CsPadCalib \
# ImgAlgos.CSPadBkgdSubtract \
CSPadPixCoords.CSPadImageProducer \
ImgAlgos.ImgRadialCorrection \
CSPadPixCoordsImgAlgos.SaveImageInFileImgSaveInFile:1
[cspad_mod.CsPadCalib]
inputKey =
outputKey = calibrated
doPedestals = yes
doPixelStatus = no
doCommonMode = no
[ImgAlgos.CSPadBkgdSubtract]
source = DetInfo(CxiDs1.0:Cspad.0)
inputKey = calibrated
outputKey = bkgd_subtracted_arr
bkgd_fname = <the-file-name-with-background-array>
norm_sector = 0
print_bits = 0
[CSPadPixCoords.CSPadImageProducer]
calibDir = /reg/d/psdm/<instrument>/<experiment>/calib
typeGroupName = CsPad::CalibV1
source = CxiDs1.0:Cspad.0
key = calibrated
imgkey = current_img
#tiltIsApplied = true
[ImgAlgos.ImgRadialCorrection]
source = DetInfo(CxiDs1.0:Cspad.0)
inkey = current_img
outkey = r_cor_img
xcenter = 866
ycenter = 857
rmin = 100
rmax = 810
n_phi_bins = 60
event = 0
print_bits = 3
[CSPadPixCoordsImgAlgos.SaveImageInFileImgSaveInFile:1]
source = CxiDs1.0:Cspad.0
key = r_cor_img
fname = <file-name-for-image-array>
#saveAll = true
eventSave = 8
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[psana]
files = /reg/d/psdm/<INSTRUMENT>/<experiment>/xtc/<file-name-1>.xtc\
/reg/d/psdm/<INSTRUMENT>/<experiment>/xtc/<file-name-2>.xtc
#skip-events = 100
events = 5
modules = ImgAlgos.PnccdImageProducer CSPadPixCoordsImgAlgos.SaveImageInFileImgSaveInFile
[ImgAlgos.PnccdImageProducer]
source = DetInfo(:pnCCD)
inkey =
outimgkey = imgpnccd
print_bits = 1
[CSPadPixCoordsImgAlgos.SaveImageInFileImgSaveInFile]
source = DetInfo(:pnCCD)
key = imgpnccd
fname = pnccd-img-ev
saveAll = true
#eventSave = 82
print_bits = 1
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[psana] files = /reg/d/psdm/<INSTRUMENT>/<experiment>/xtc/<file-name-1>.xtc modules = ImgAlgos.CameraImageProducer ImgAlgos.SaveImageInFileImgSaveInFile events = 5 [ImgAlgos.CameraImageProducer] source = DetInfo(:Opal1000) key_in = key_out = img subtract_offset = true print_bits = 15 [ImgAlgos.SaveImageInFileImgSaveInFile] source = DetInfo(:Opal1000) key = img fname = img-from-my-experiment saveAll = true #eventSave = 1 |
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