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  • command: optical_metrology_epix10ka2m -i 2021-02-02-epix10ks2m.1-metrology.txt -o 2021-02-02-epix10ks2m.1-geometry.txt -v1 -Z -118000
  • file: /reg/g/psdm/detector/alignment/epix10ka2m/calib-xxx-epix10ka2m.1-2021-02-02/2021-02-02-epix10ks2m.1-geometry.txt

Validation on data

Code Block
title2021-02-20 Alex Batyuk email
collapsetrue
Alex Batyuk <batyuk@stanford.edu>
Sat 2/20/2021 4:36 PM
Hi Mikhail,
We've collected some silver behenate rings on ePix10k-2M.1 last night in mfxc00118 experiment. Run 243 is the same as 242 + 30 mm in Z, 244 is the same as 243 + 30 mm in Z.
Best wishes,
Alex

det_calib_ave_and_max exp=mfxc00118:run=242 MfxEndstation.0:Epix10ka2M.0 5000

geometry_image -g 2021-02-02-epix10ks2m.1-geometry-mfxc00118.txt -a det-calib-mfxc00118-r242-e7652-max.txt -n1 -p10 -R200 -o det-calib-mfxc00118-r242-e7652-max.png

Images for runs 242, 243, 244 and 243 zoomed

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Validation on data mfxlx4219 r0048 on 2021-05-15

Chuck has generated data array with rings

/reg/g/psdm/detector/alignment/epix10ka2m/calib-xxx-epix10ka2m.1-2021-02-02/det-calib-mfxlx4219-r0048-chuck-mean.npy → mfxlx4219_0048_epix10k2M_mean.npy

commands to process:


geometry_image -g geo.txt -a mfxlx4219_0048_epix10k2M_mean.npy -R50 --amin 0 --amax 30 -s recentered
geometry_image -g geo.txt -a mfxlx4219_0048_epix10k2M_mean.npy -R50 --amin 0 --amax 30 -s lab-frame -C1

Images for re-centered geometry psana frame (-C0)


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Images for re-centered geometry LAB frame / crystfel (-C0)


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Command to convert psana to crystfel format:

geometry_convert -d epix10ka -f 2021-02-02-epix10ks2m.1-geometry-recentred-for-crystfel.txt -o 2021-02-02-epix10ks2m.1-geometry-recentred-for-crystfel.geom

Re-centered geometry files

/reg/g/psdm/detector/alignment/epix10ka2m/calib-xxx-epix10ka2m.1-2021-02-02/

-rw-r--r-- 1 dubrovin br 18296 May 15 12:33 2021-02-02-epix10ks2m.1-geometry-recentred-for-crystfel.geom
-rw-r--r-- 1 dubrovin br 3343 May 15 12:23 2021-02-02-epix10ks2m.1-geometry-recentred-for-crystfel.txt
-rw-r--r-- 1 dubrovin br 3340 May 15 12:23 2021-02-02-epix10ks2m.1-geometry-recentred-for-psana.txt

Validation on data mfxp21319-r0014 on 2021-06-07

det_calib_ave_and_max exp=mfxp21319:run=14 MfxEndstation.0:Epix10ka2M.0 10000

geometry_image -g geo.txt -a det-calib-mfxp21319-r0014-max.npy -R50 --amin 0 --amax 1500 -s mfxp21319-r0014

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In mfxp21319-r0014 averaged/max over 10k events image contains crystal diffraction pattern which does not allow visually re-center detector. Single bright ring is most likely from scattering on nozzle or mount, which has nothiong to do with sample. BTW, default geometry with 0 offsets works good.

References

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