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Evolution of calibration system of LCLS creates new opportunities and increase complexity. Large number of detectors and scripts for calibration processing makes it hard to track down what is going on. This note is intended to collect in one spot references to location of all intermediate repositories and log files.
Environment variables
psana/psdm
lcls1
source /cds/sw/ds/ana/conda1/manage/bin/psconda.sh, setup_testrel
export SIT_ROOT=/reg/g/psdm/
export SIT_DATA=/cds/group/psdm/data/
export SIT_PSDM_DATA=/cds/data/psdm/
lclc2
source /cds/sw/ds/ana/conda2/manage/bin/psconda.sh
export DIR_PSDM=/cds/group/psdm
s3df
lcls1
source /sdf/group/lcls/ds/ana/sw/conda1/manage/bin/psconda.sh, setup_testrel
export SIT_ROOT=/sdf/group/lcls/ds/ana/
export SIT_DATA=/sdf/group/lcls/ds/ana/data/
export SIT_PSDM_DATA=/sdf/data/lcls/ds/
lclc2
source /sdf/group/lcls/ds/ana/sw/conda2/manage/bin/psconda.shLCLS scripts
| script | record at start | repository | logs | control parameters | comments |
|---|---|---|---|---|---|
| area detectors | |||||
calibrun | for >ana-4.0.46-py3: | /reg/g/psdm/logs/calibman/<year>/<month>/<time-stamp>-log-<login>-<job-id>.txt | N/A | CLI dark processing for generic detector | |
| calibfile | /reg/g/psdm/logs/calibman/<year>/<month>/calibfile.txt | -l, --lfname | CLI for calib file deployment under .../<experiment>/calib/... | ||
| geometry_deploy_constants | /reg/g/psdm/logs/atstart/<year>/<year>_lcls1_geometry_deploy_constants.txt | /reg/g/psdm/detector/calib/geometry/ | <repository>/<dettype>/<dettype>_<full-lcls1-detector-name>_<time-stamp>.data | -o, --dirrepo | Geometry calibration constants deployment CLI |
| dcs | /reg/g/psdm/logs/atstart/<year>/<year>_lcls1_dcs.txt |
or parameter -c <path to local calib> e.g.: -c /reg/d/psdm/detector/calib # detector-dependent repo | run-time only | ||
deploy_constants for releases > ana-4.0.42 | /reg/g/psdm/logs/atstart/<year>/<year>_lcls1_deploy_constants.txt | /reg/g/psdm/detector/calib/constants/ | <repository>/logs/<YEAR>/<time-stamp>_log_deploy_constants_<uid>.txt | -o , --dirrepo | Deployment of default constants for all generic (one gain range) detectors |
| epix10ka | |||||
| epix10ka_offset_calibration | <repository>/logs/<year>_epix10ka_offset_calibration.txt for >ana-4.0.37: /cds/group/psdm/logs/atstart/<year>/<year>_lcls1_epix10ka_offset_calibration.txt | /reg/g/psdm/detector/gains/epix10k/panels/ | <repository>/logs/<year>/<time-stamp>_log_epix10ka_offset_calibration_<login>.txt ???? | -o, --dirrepo | Processing of the charge injection runs with 103 steps/calib-cycles |
| epix10ka_pedestals_calibration | <repository>/logs/<year>_epix10ka_pedestals_calibration.txt for >ana-4.0.37: /cds/group/psdm/logs/atstart/<year>/<year>_lcls1_epix10ka_offset_calibration.txt | /reg/g/psdm/detector/gains/epix10k/panels/ | <repository>/logs/<year>/<time-stamp>_log_epix10ka_pedestals_calibration_<login>.txt | -o, --dirrepo | Dark processing of runs with 5 steps/calib-cycles |
| epix10ka_deploy_constants | <repository>/logs/<year>_epix10ka_deploy_constants.txt for >ana-4.0.37: /cds/group/psdm/logs/atstart/<year>/<year>_lcls1_epix10ka_deploy_constants.txt | /reg/g/psdm/detector/gains/epix10k/panels/ | <repository>/logs/<year>/<time-stamp>_log_epix10ka_deploy_constants_<login>.txt | -o, --dirrepo | Merging and deployment ofper-panel constants. |
| Jungfrau | |||||
| jungfrau_dark_proc | <repository>/logs/<year>_log_jungfrau_dark_proc.txt for >ana-4.0.37: /cds/group/psdm/logs/atstart/<year>/<year>_lcls1_jungfrau_dark_proc.txt | /reg/g/psdm/detector/gains/jungfrau/panels/ contains per-panel constants | <repository>/logs/<year>/<time-stamp>_jungfrau_dark_proc_<login>.txt | -o, --dirrepo | replacement for jungfrau_ndarr_dark_proc intended for per-panel calibration constants. Dark processing of runs with 3 steps/calib-cycles |
| jungfrau_deploy_constants | <repository>/logs/<year>_log_jungfrau_deploy_constants.txt for >ana-4.0.37: /cds/group/psdm/logs/atstart/<year>/<year>_lcls1_jungfrau_deploy_constants.txt | /reg/g/psdm/detector/gains/jungfrau/panels/ | <repository>/logs/<year>/<time-stamp>_jungfrau_deploy_constants_<login>.txt | -o, --dirrepo | works after jungfrau_dark_proc to merge and deploy constants under .../<experiment>/calib/... |
| jungfrau_gain_constants | for >ana-4.0.44 /cds/group/psdm/logs/atstart/<year>/<year>_lcls1_jungfrau_gain_constants.txt | /reg/g/psdm/detector/gains/jungfrau/ - reference to dirs with gain constants for panel-ids | /reg/g/psdm/logs/calibman/jungfrau_gain/<year>/<time-stamp>-<experiment>-<run>-<login>.txt for >ana-4.0.44: /reg/g/psdm/detector/gains/jungfrau/logs/<year>/<time-stamp>_log_jungfrau_gain_constants_<experiment>-r<run>_<login>.txt | -R, --repdir | |
DEPRECATED jungfrau_ndarr_dark_proc | /reg/g/psdm/logs/calibman/<year>/<month>/jungfrau_ndarr_dark_proc.txt - log record at start | Dark processing and deployment of calibration constants for etire detector. It was DEPRECATED due to new per-panel approach to calibration constants. Replaced by jungfrau_dark_proc and jungfrau_deploy_constants | |||
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