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changes.mady.by.user Mikhail Dubrovin

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New Version 2

changes.mady.by.user Mikhail Dubrovin

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module load python
conda env create --name ps-0.1.1-py2 py3 -f env_create.yaml
source activate ps-0.1.1-py2py3

where the file env_create.yaml contains the list of require packages.

Originally it is located in https://github.com/slac-lcls/relmanage/blob/master/env_create.yaml or env_create_py2.yaml for python2.

Code Block
titleSlightly Our version of env_create.yaml has slightly modified content of the file env_create_py2.yaml
collapsetrue
 channels:
  - defaults
  - conda-forge
dependencies:
  - python=23.76
  - cmake
  - h5py
  - ipython
  - numpy
  - cython
  - matplotlib
  - mpi4py
  - nose
  - pyzmq
  - versioneer
  - requests

Build

...

for python2.7

cd lcls2

export CRAYPE_LINK_TYPE=dynamic

...

export PYTHONPATH=$INSTDIR/lib/python2.7/site-packages

Build for python3.6

cd lcls2

export CRAYPE_LINK_TYPE=dynamic
./build_python3_psana.sh
export INSTDIR=`pwd`/install
export PYTHONPATH=$INSTDIR/lib/python3.6/site-packages

Run apps

python
> import psana

...