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- Setup the top level job options environment variable to point to your top level job options file. For example:
in csh: setenv JOBOPTIONS $USHERNFS/RealData/readdigi_runrecon.txt
in bash: JOBOPTIONS=${USHERNFS}/RealData/readdigi_runrecon.txt; export JOBOPTIONS;
- Before you can run a job you need to reset the permissions (why?)
chmod u+=rwx *
chmod g+=rw *
does the trick for me.
Submit the batch job
- bsub -q long -o $USHERNFS/RealData/recon.out $CMTPATH/Gleam/v5r8
p1/rh9_gcc32/Gleam.exe
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