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1 About this tutorial
The main objective of this session is to introduce and to explain the new Python interface for accessing LCLS data from analysis applications. The new software framework is known as the "Interactive psana" or just ipsana. The first idea of implementing such tool was suggested around 1 and a half years ago at the joint PCDS/SRD meeting (look for ipsana). Though its underlying machinery is largely based on the batch version of psana the interface to the data is much simple, more intuitive, and it requires much less code to be written by a user in order to get to "that CSPad image" (EPICS PV, etc.). The new framework won't work for everyone, especially for those users who have either heavily invested into the modular code of the batch frameworks, or who needs the performance of modules written in C++. Still our intent is to demonstrate the power of the new approach and to encourage using the tool where it seems to be appropriate.
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The last two features are opening an interesting possibility of using psana for real-time monitoring of data while benefiting from reusing
the same code which might be developed for the traditional OFFLINE processing/analysis.
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2 Things to know before to run the examples
The location of examples
We put all examples for today's session at the following diretory:
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- AMO/amotut13
- SXR/sxrtut13
- XPP/xpptut13
- XCS/xcstut13
- CXI/cxitut13
- MEC/mectut13
Each experiment's directory has the standard structure of directories at the OFFLINE storage:
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ls -al ls -al /reg/d/psdm/XPP/xpptut13/ drwxr-sr-x 8 psdatmgr ps-data 4096 Jun 4 12:02 . drwxrwsr-x 30 psdatmgr ps-data 4096 Jun 4 12:02 .. drwxrwsr-x+ 3 psdatmgr ps-data 4096 Jun 5 10:53 calib drwxrwsr-x+ 2 psdatmgr ps-data 4096 Jun 4 12:02 ftc drwxr-sr-x 2 psdatmgr ps-data 4096 Jun 6 16:41 hdf5 drwxrwsr-x+ 2 psdatmgr ps-data 4096 Jun 4 12:02 res drwxrwsr-x+ 2 psdatmgr ps-data 4096 Jun 4 12:03 scratch drwxr-sr-x 2 psdatmgr ps-data 4096 Jun 6 16:33 xtc ls -al /reg/d/psdm/XPP/xpptut13/hdf5/ drwxr-sr-x 2 psdatmgr ps-data 4096 Jun 6 16:41 . drwxr-sr-x 8 psdatmgr ps-data 4096 Jun 4 12:02 .. -r--r--r-- 1 psdatmgr ps-data 1765036151 Jun 6 16:39 xpptut13-r0178.h5 -r--r--r-- 1 psdatmgr ps-data 394528165 Jun 6 16:39 xpptut13-r0179.h5 -r--r--r-- 1 psdatmgr ps-data 128185688 Jun 6 16:39 xpptut13-r0180.h5 -r--r--r-- 1 psdatmgr ps-data 912811050 Jun 6 16:39 xpptut13-r0181.h5 |
All data files are open for reading by anyone who can log onto PCDS computers. Moreover, those directories (like scratch/, ftc/) are open for writing by anyone. And yes, one can also see these experiments in the Web Portal.
Setting up your environment
- make sure you can run X11 applications. Most examples of this tutorial will do a simple visualization.
- log onto any machine of interactive analysis clusters psananeh or psanafeh
- make sure you sources (just once) one of the following scripts (depending on which UNIX shell you are using):
Code Block . /reg/g/psdm/etc/sit_env.sh source /reg/g/psdm/etc/sit_env.csh